Job Description P76387 Confidence 87.00% Date Thu Jan 5 12:22:28 GMT 2012 Rank 307 Aligned Residues 146 % Identity 14% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	R	S	L	R	T	S	L	H	F	A	M	M	Q	A	Q	N	N	V	L	M	M	T	G	V	S	P	S	I	G	K	T	F	V	C	A	N	L	A	A	V	I	S	Q	T	N	K	R	V	L	L	I	D	C	D	M	R	K	G	Y	T	H	E	L	L	G	T	N	N	V	N	G	L	S	E	I	L	I
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	R	E	Q	A	Q	Q	L	L	L	R	L	L	P	D	S	G	N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	E	R	G	H	R	V	A	V	L	A	V	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															G	G	G				S									T	T	S	S														T	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	G	D	I	T	T	A	A	K	P	T	S	I	A	K	F	D	L	I	P	R	G	Q	V	P	P	N	P	S	E	L	L	M	S	E	R	F	A	E	L	V	N	W	A	S	K	N	Y	D	L	V	L	I	D	T	P	P	I	L	A	V	T	D	A	A	I	V	G	R	H	V	G	T	T	L	M	V	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.													.	.	.	.																				.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.													.	.	.	.																				.	.												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	R	L	A	V	H	P	N	A	Y	I	R	.	.	.	.	P	S	T	L	G	G	V	T	R	A	T	R	E	T	V	V	L	L	E	.	.	A	A	G	F	D	V	I	L	I	E	T	.	.	.	.	.	G	Q	S	E	V	A	V	A	N	M	V	D	T	F	V	L	L	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.					T	S	T	T					.	.	.	.																				.	.		T	T									.	.	.	.	.									T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.													.	.	.	.																				.	.												.	.	.	.	.
Template SS confidence
										113	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	V	N	T	L	K	E	V	E	T	S	L	S	R	F	E	Q	N	G	I	P	V	K	G	V	I	L	N	S	I	F
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		A	R	T	G	D	Q	L	Q	G	I	K	K	G	V	L	.	.	.	.	.	E	L	A	D	I	V	V	V	N	K	A	D
Template Known Secondary structure		S		T	T	T	T	T	T	T			T	T	G	G	.	.	.	.	.	G	G		S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions