Job Description P76387 Confidence 97.13% Date Thu Jan 5 12:22:28 GMT 2012 Rank 80 Aligned Residues 141 % Identity 9% Template c1nijA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yjia; PDBTitle: yjia protein Resolution 2.00 Å

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		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	M	T	G	V	S	P	S	I	G	K	T	F	V	C	A	N	L	A	A	V	I	S	Q	T	N	K	R	V	L	L	I	D	C	D	M	R	K	G	Y	T	H	E	L	L	G	T	N	N	V	N	G	L	S	E	I	L	I	G	Q	G	D	I	T	T	A	A	K	P	T	S	I	A	K	F	D	L	I	P
Query Conservation
Alig confidence																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	.	.	Q	H	G	Y	K	I	A	V	I	E	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T
Template Known Secondary structure								S	S	S	S	S											S	.	.											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T	S							T
Template Predicted Secondary structure																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40																							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		609	610					.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.										.	660	.	.	.	.	.	.	.	.	.	670			.	.	.
Predicted Secondary structure				.	.	.	.																																																	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence				.	.	.	.																																																	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		R	G	.	.	.	.	Q	V	P	P	N	P	S	E	L	L	M	S	E	R	F	A	E	L	V	N	W	A	S	K	N	Y	D	L	V	L	I	D	T	P	P	I	L	A	V	T	D	A	A	I	V	G	R	H	.	.	.	.	.	.	.	.	.	V	G	T	T	L	M	V	A	R	Y	A	V	.	.	N	T	L
Query Conservation				.	.	.	.																																																	.	.	.	.	.	.	.	.	.													.	.
Alig confidence				.	.	.	.											.	.																																					.	.	.	.	.	.	.	.	.													.	.
Template Conservation																		.	.
Template Sequence		N	G	C	I	C	C	S	R	S	N	E	L	E	D	A	L	.	.	L	D	L	L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M
Template Known Secondary structure		T	S						T	T	S							.	.										T	S				S								T	T													S																		T	T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	E	T	S	L	S	R	F	E	Q	N	G	I	P	V	K	G	V	I	L	N	S	I	F
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		N	Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	.	.	.	.	I	L	L	T	K	T	D
Template Known Secondary structure													T		S		.	.	.	.						T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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