Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG8
Confidence32.37%DateThu Jan 5 11:29:05 GMT 2012
Rank5Aligned Residues139
% Identity13%Templatec3kwsB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50........ .60.........70.........
Predicted Secondary structure 














.




Query SS confidence 

























































.




















Query Sequence  MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDG. SYNIDQGVGVRAISGEKTGFA
Query Conservation                 
    
   
  
   
 
  

         
      
   .      
 



  


 
 
Alig confidence 














....


























........



.



















.
Template Conservation    


          .... 
 
 
      






        ........       
   

            .
Template Sequence  LELKLSFQEGIAPGE. . . . SLNEKLDFXEKLGVVGFEPGGGGLAGR. . . . . . . . VNEIKQALNGRNIKVSAICAGFKGF.
Template Known Secondary structure 


TTSS

S....STT


BSTT........TTSS





S
.
Template Predicted Secondary structure 









....








........








.
Template SS confidence 















































































   4950.........60... ......70.........80.........90 .........100.........110.....
 
   80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 
































Query SS confidence 









































































Query Sequence  YADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQ
Query Conservation   
  
    
      
   
                               
                   
 
Alig confidence  .








































































Template Conservation  .        
          
  
  


  
                          
      
    
 
 
Template Sequence  . ILSTDPAIRKECXDTXKEIIAAAGELGSTGVIIVPAFNGQVPALPHTXETRDFLCEQFNEXGTFAAQHGTSVI
Template Known Secondary structure  .TTBSSTT
S
S

TT

SB

SSTT

Template Predicted Secondary structure  .
























Template SS confidence 









































































   116...120.........130.........140.........150.........160.........170.........180........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions