 |
Job Description | P76562 | Confidence | 32.85% | Date | Thu Jan 5 12:24:40 GMT 2012 |
Rank | 431 | Aligned Residues | 87 |
% Identity | 10% | Template | d1ybha1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 2.50 |
|
 |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | P | Q | P | E | Q | Q | Q | L | L | K | Q | L | M | T | M | P | P | G | V | A | A | V | T | A | A | R | G | R | G | K | S | A | L | A | G | Q | L | I | S | R | I | A | G | R | A | I | V | T | A | P | A | K | A | S | T | D | V | L | A | Q | F | A | G | E | K | F | R | F | I | A | P | D | A | L | L | A | S | D |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
K | P | P | E | D | S | H | L | E | Q | I | V | R | L | I | S | E | S | K | K | P | V | L | Y | V | G | G | G | C | L | N | S | S | D | E | L | G | R | F | V | E | L | T | G | I | P | V | A | S | T | L | M | G | L | G | S | Y | P | D | . |
D | E | L | S | L | H | M | L | G | M | H | G | T | V | Y | A | N | Y | A | V |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| T | T | T | T | T | S |
|
|
| . |
| T | T |  |  |  |  |
| S | T | T | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | |
. | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
  |
  |   |
254 | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | A | D | W | L | V | V |
Query Conservation |   |
  |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |
Template Sequence |   |
E | H | S | D | L | L | L | A |
Template Known Secondary structure |   |
 |  |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
362 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|