|   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
P | Q | P | E | Q | Q | Q | L | L | K | Q | L | M | T | M | P | P | G | V | A | A | V | T | A | A | R | G | R | G | K | S | A | L | A | G | Q | L | I | S | R | I | A | G | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | I | V | T | A | P | A | K | A | S | T | D | V | L | A | Q | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|
|   |   |
|
|
|   |
|
|   |
| . | . |   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | T | P | I | Q | K | N | A | I | P | A | I | L | E | H | . |
. |
R | D | I | M | A | C | A | Q | T | G | S | G | K | T | A | A | F | L | I | P | I | I | N | H | L | V | C | Q | D | L | K | T | A | Y | P | K | C | L | I | L | A | P | T | R | E | L | A | I | Q | I | L | S | E | S | Q | K | F | S | L | N | T | P | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| B |
|
| S |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
|
. | 270 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | E | K | F | R | F | I | A | P | D | A | L | L | A | S | . |
. |
. |
. |
. |
. |
. |
D | E | Q | A | D | W | L | V | V | D | E | A | A | A | I | P | . |
. |
. |
. |
A | P | L | L | H | Q | L | V | S | . |
. |
. |
. |
. |
. |
. |
. |
R |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |   |
|   |
|   |   |
|
|   | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
R | S | C | V | V | Y | G | G | A | D | T | H | S | Q | I | R | E | V | Q | M | G | C | H | L | L | V | A | T | P | G | R | L | V | D | F | I | E | K | N | K | I | S | L | E | F | C | K | Y | I | V | L | D | E | A | D | R | M | L | D | M | G | F | E | P | Q | I | R | K | I | I | E | E | S | N | M | P | S | G | I | N |
Template Known Secondary structure |   |
|  |  |  |  |
| S | S | S |
| S |  |  |  |  |  |  |  | S | S |
|
| S |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T | S | B |
|
| T | T |
|
|  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | S | S |
|
|
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | R | T | L | L | T | T | T | V | Q |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|
|   |   |
Template Sequence |   |
R | Q | T | L | M | F | S | A | T | F | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
371 | . | . | . | . | . | . | . | . | 380 | . |
  |