Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence91.99%DateThu Jan 5 12:24:40 GMT 2012
Rank225Aligned Residues113
% Identity19%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.... .....200.........210......... 220.........230.........240.....
Predicted Secondary structure 



.............






.







Query SS confidence 














. . . . . . . . . . . . .
























.

























Query Sequence  QQQLLKQLMTMPPGV. . . . . . . . . . . . . AAVTAARGRGKSALAGQLISRIAGR. AIVTAPAKASTDVLAQFAGEKFRFIA
Query Conservation 
  

          ............. 
















 
     .
 



   

  

      
 
 
Alig confidence 














.............
























.

























Template Conservation 
  

  
   
                 

 



 


 

  

  
                    
 
       
Template Sequence  QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG
Template Known Secondary structure 
TT
S
TTS
S
STTSST
GGG
SSSS

SSS



S
S
Template Predicted Secondary structure 






























Template SS confidence 















































































   463......470.........480.........490.........500.........510.........520.........530.........540..
 
   246.. .250.........260.........270.........280. ........290...
Predicted Secondary structure  ......















................






Query SS confidence 


. . . . . .
































. . . . . . . . . . . . . . . .











Query Sequence  PDA. . . . . . LLASDEQADWLVVDEAAAIPAPLLHQLVSRFPR. . . . . . . . . . . . . . . . TLLTTTVQGYEG
Query Conservation 

 ......
       











 
 
  

    
................











Alig confidence 


......







.























................











Template Conservation        
          .

 



          

     
               
 
 
 
     
Template Sequence  FDQGGLLTDAVIKHPHA. VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRA
Template Known Secondary structure  TT
SS.TGGGS
STTT
TT
SS


Template Predicted Secondary structure 






.




















Template SS confidence 





































































   543......550......... 560.........570.........580.........590.........600.........610.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions