Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence62.89%DateThu Jan 5 12:24:40 GMT 2012
Rank322Aligned Residues104
% Identity19%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.... .....200.........210.........220....... ..
Predicted Secondary structure 



..................









............
Query SS confidence 














. . . . . . . . . . . . . . . . . .
































. . . . . . . . . . . .

Query Sequence  QQQLLKQLMTMPPGV. . . . . . . . . . . . . . . . . . AAVTAARGRGKSALAGQLISRIAGRAIVTAPAK. . . . . . . . . . . . AS
Query Conservation 
  

          .................. 
















 
     
 



  ............ 
Alig confidence 














..................
































............

Template Conservation 
  
   
   
                     


 







 


 

  
                         
Template Sequence  QADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSI
Template Known Secondary structure 
TTSS







TTSST

GGGGSS

SGGGSTT
Template Predicted Secondary structure 



























Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   230.........240.........250.........260........ .270.........280 .
Predicted Secondary structure 
















...............



.............
Query SS confidence 






































. . . . . . . . . . . . . . .











. . . . . . . . . . . . .
Query Sequence  TDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIP. . . . . . . . . . . . . . . APLLHQLVSRFP. . . . . . . . . . . . . R
Query Conservation 
  

      
 
 


 
       











............... 
 
  

    .............
Alig confidence 

















.........











...............











.............
Template Conservation                    ......... 
   

                       

  

               
 
Template Sequence  IRDLTDSAGGAIDAVEQN. . . . . . . . . GIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHIL
Template Known Secondary structure  TTTT
.........

GGGGS

SS

SS

TT
TT
Template Predicted Secondary structure 

.........
























Template SS confidence 















































































   100.........110....... ..120.........130.........140.........150.........160.........170
 
   282.......290..
Predicted Secondary structure 





Query SS confidence 










Query Sequence  TLLTTTVQGYE
Query Conservation 










Alig confidence 










Template Conservation   
         
Template Sequence  FIASGAFQVAR
Template Known Secondary structure 

SSS
Template Predicted Secondary structure 



Template SS confidence 










   305....310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions