Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence96.74%DateThu Jan 5 12:24:40 GMT 2012
Rank153Aligned Residues87
% Identity25%Templated1gl9b1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Helicase-like "domain" of reverse gyrase
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210........ .220.........230......
Predicted Secondary structure 












...


................
Query SS confidence 










































. . .

















. . . . . . . . . . . . . . . .
Query Sequence  PQPEQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRIAG. . . RAIVTAPAKASTDVLAQF. . . . . . . . . . . . . . . .
Query Conservation   
 

  

           
















 
    ... 
 



   

  

  ................
Alig confidence 













..


























...

















................
Template Conservation 
   
       
 ..    

 



 


       
         


 

  
  
    
               
Template Sequence  PRAIQKMWAKRILR. . KESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLI
Template Known Secondary structure 

T..T




TTS
TTT

SSTTT



TTT
Template Predicted Secondary structure 


..



















Template SS confidence 















































































   57..60.........70 .........80.........90.........100.........110.........120.........130....
 
   237..240.........250.... .....260....
Predicted Secondary structure  ...................







...




Query SS confidence  . . . . . . . . . . . . . . . . . . .

















. . .









Query Sequence  . . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALLASDE. . . QADWLVVDEA
Query Conservation  ...................    
 
 


 
     ...  







Alig confidence  ...................

















...









Template Conservation                         
                    




 
Template Sequence  GYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDV
Template Known Secondary structure 
S


TTTTS
SSSSS


SS
S
Template Predicted Secondary structure 























Template SS confidence 

















































   135....140.........150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions