Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence46.60%DateThu Jan 5 12:24:40 GMT 2012
Rank370Aligned Residues43
% Identity16%Templatec3l0oB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:transcription termination factor rho; PDBTitle: structure of rna-free rho transcription termination factor from2 thermotoga maritima
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190... ......200.........210......... 220....
Predicted Secondary structure 



.






....
Query SS confidence 











.

























. . . .




Query Sequence  QLLKQLMTMPPG. VAAVTAARGRGKSALAGQLISRIAGR. . . . AIVTA
Query Conservation   

         .  
















 
     ....
 


Alig confidence 











.

























....




Template Conservation 



 
 






  
 
  
 


 

  

  
         
  
Template Sequence  RLIDLFAPIGKGQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIIL
Template Known Secondary structure  S

BTT

TTSS
TTS
Template Predicted Secondary structure 

















Template SS confidence 















































   164.....170.........180.........190.........200.........210.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions