Job Description P76562 Confidence 97.70% Date Thu Jan 5 12:24:40 GMT 2012 Rank 116 Aligned Residues 111 % Identity 22% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	.	.	.	.	.	.	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																					.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		H	A	Q	R	D	E	F	L	K	L	Y	Q	N	N	Q	.	.	I	M	V	F	V	G	E	T	G	S	G	K	T	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	T	Q	P	R	R	V	A	A	M	S	V	A	Q	R	V	A	E	E	M	D	V	K	L	G	E	E	V	G
Template Known Secondary structure		G	G	G												S	.	.								T	T	S	S															G	G	G	G	T								S																T	T			B	T	T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
												237	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																					.	.	.	.	.	.									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																					.	.	.	.	.	.									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	.	.	.	.	.	.	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	L	.	.	.	.	.	.	L	H	Q	L	V	S	R	F	.	.	.	P	R	T	L	L	T	T	T	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																					.	.	.	.	.	.									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																					.	.	.	.	.	.									.	.	.
Template Conservation
Template Sequence		Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y	M	T	D	G	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L	L	K	Q	V	V	K	R	R	P	D	L	K	I	I	I	M	S	A	T	L	D
Template Known Secondary structure					T	T						T	T																			T	T		T	T									G	G	G																				T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions