Job Description P76562 Confidence 98.43% Date Thu Jan 5 12:24:40 GMT 2012 Rank 47 Aligned Residues 132 % Identity 11% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		N	I	V	I	S	A	F	E	Q	T	L	W	Q	S	D	P	E	T	P	L	K	V	Y	Q	L	L	S	G	A	H	Y	R	T	S	P	L	D	L	R	R	M	M	.	.	.	.	.	.	D	A	P	G	Q	H	F	L	Q	A	A	G	E	N	E	I	A	G	A	L	W	L	V	D	E	G	G	L	S	Q	Q	L
Query Conservation																																												.	.	.	.	.	.
Alig confidence																										.																		.	.	.	.	.	.																															.	.
Template Conservation																										.																																																						.	.
Template Sequence		S	V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	.	Y	Y	F	G	D	K	A	A	S	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P	A	P	K	.	.
Template Known Secondary structure										G	G	G	G	G	G	G										.				G	G	G														T	T	T	S	T	T											T	T												S			G	G	.	.
Template Predicted Secondary structure																										.																																																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		S	Q	A	V	W	A	G	F	R	R	P	R	G	N	L	V	A	Q	S	L	A	A	H	G	N	N	P	L	A	A	T	L	R	G	R	R	V	S	R	I	A	V	H	P	A	R	Q	R	E	G	T	G	R	Q	L	I	A	G	A	L	Q	Y	T	Q	D	L	D	Y	L	S	V	.	.	.	S	F	G	Y	T	G
Query Conservation																																																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	Q	X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L	X	K	H	L	A	T	I	A	I	T	H	N	C	Q	R	L	D	W	T	A	E	S	T	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G													G	G	G	T	T	S																	T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	W	R	F	W	Q	R	C	G	F	V	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	G	K	F	Y	K	S	I	G	A	S	L	I
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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