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Job DescriptionP76562
Confidence95.90%DateThu Jan 5 12:24:40 GMT 2012
Rank176Aligned Residues111
% Identity23%Templatec3fe2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:probable atp-dependent rna helicase ddx5; PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210........ .220.........230......
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Query Sequence  PQPEQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRIAG. . . . . . . . . . . RAIVTAPAKASTDVLAQF. . . . . . . .
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Template Sequence  PTAIQAQGWPVALS. . GLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC
Template Known Secondary structure 

T..T



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S
SST
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   117..120.........130 .........140.........150.........160.........170.........180.........190....
 
   237..240.........250.. .......260........ .270........ .280
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALLAS. . . . . . . DEQADWLVVDEAAAIP. . . . APLLHQLVSR. . . . FP
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Template Sequence  RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQ
Template Known Secondary structure  T


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S
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TT

TTTT
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TT
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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   281.......
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Query Sequence  RTLLTTTV
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Template Sequence  TLMWSATW
Template Known Secondary structure  S

Template Predicted Secondary structure 


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   275....280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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