 |
Job Description | P76562 | Confidence | 56.87% | Date | Thu Jan 5 12:24:40 GMT 2012 |
Rank | 335 | Aligned Residues | 82 |
% Identity | 16% | Template | c3f8tA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:predicted atpase involved in replication control, |
PDBTitle: crystal structure analysis of a full-length mcm homolog2 from methanopyrus kandleri
|
Resolution | 1.90 Å |
|
 |
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | A | V | T | A | A | R | G | R | G | K | S | A | L | A | G | Q | L | I | S | R | I | A | G | R | A | I | V | T | A | P | A | K | A | S | T | D | V | L | A | Q | F | A | G | E | K | F | R | F | I | A | P | D | A | L | L | A | S | D | E | Q | A | D | W | L | V | V | D | E | A | A | A | I | P | A | P | L | L | H |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
Template Sequence |   |
H | V | L | L | A | G | Y | P | V | V | C | S | E | I | L | H | H | V | L | D | H | L | A | P | R | G | V | Y | V | D | L | R | R | T | E | L | T | D | L | T | A | V | L | K | E | D | R | G | W | A | L | R | A | G | A | A | V | L | . |
. |
A | D | G | G | I | L | A | V | D | H | L | E | G | A | P | E | P | H | R | W |
Template Known Secondary structure |   |
|  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  | G | G | G |
|
|  |  |  |  | S |  |  |  |  |  | S | S | S |  |  |  |  |  |
|  |  |  |  | . | . | T | T | T | S |  |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | |
|
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
  |
  |   |
274 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
Q | L | V | S |
Query Conservation |   |
  |
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|   |
|
Template Sequence |   |
A | L | M | E |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
319 | 320 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|