Job Description P76562 Confidence 28.79% Date Thu Jan 5 12:24:40 GMT 2012 Rank 472 Aligned Residues 248 % Identity 12% Template c3eyaE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	T	A	Q	M	K	R	E	G	I	R	R	L	L	V	L	S	G	E	E	G	W	C	F	E	H	T	L	K	L	R	D	A	L	P	G	D	W	L	W	I	S	P	R	P	D	A	E	N	H	C	S	P	S	A	L	Q	T	L	L	G	R	E	F	R	H	A	V	F	D	A	R	H	G	F	D	A	A
Query Conservation
Alig confidence																										.	.																											.	.	.																						.
Template Conservation																										.	.																											.	.	.																						.
Template Sequence		A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	V	T	G	D	S	L	N	.	.	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	.	.	.	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P	G	.	N	L	H
Template Known Secondary structure											T	T										G	G	G		.	.											S	S						S	S								.	.	.									S	S								T	T			.			T
Template Predicted Secondary structure																										.	.																											.	.	.																						.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure														.											.	.	.	.	.	.	.	.	.	.	.																																													.	.
Query SS confidence														.											.	.	.	.	.	.	.	.	.	.	.																																													.	.
Query Sequence		A	F	A	A	L	S	G	T	L	K	A	G	.	S	W	L	V	L	L	L	P	V	W	.	.	.	.	.	.	.	.	.	.	.	E	E	W	E	N	Q	P	D	A	D	S	L	R	W	S	D	C	P	D	P	I	A	T	P	H	F	V	Q	H	L	K	R	V	L	T	A	D	N	E	A	I	L	W	R	.	.
Query Conservation														.											.	.	.	.	.	.	.	.	.	.	.																																													.	.
Alig confidence														.											.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation
Template Sequence		L	I	N	G	L	F	D	C	H	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L	N	R	G	V	S	V	V	V	L	P
Template Known Secondary structure		T										T	T										S		G	G	G	T	T	S			T	T								T	S	T	T		S							S	G	G	G															T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
					154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	N	Q	P	F	S	L	A	H	F	T	P	R	T	D	W	Y	P	A	T	G	A	P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		G	D	V	A	L	K	P	A	P	E	G	A	T	M	H	W	Y	H	A	P	Q	P	V	V	T	P	E	E	E	E	L	R	K	L	A	Q	L	L	R	Y	S	S	N	I	A	L	M	C	G	S	G	C	A	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	R	G	K	E	H	V
Template Known Secondary structure						T	S	B			T	T																													T			S							G	G	G	T	T													T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L	A	Q	F	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L
Template Known Secondary structure		S	S	S		T	T	B					S	T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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