 |
Job Description | P76562 | Confidence | 73.93% | Date | Thu Jan 5 12:24:40 GMT 2012 |
Rank | 294 | Aligned Residues | 84 |
% Identity | 7% | Template | c3dnsA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:ribosomal-protein-alanine acetyltransferase; |
PDBTitle: the n-terminal domain of ribosomal-protein-alanine acetyltransferase2 from clostridium acetobutylicum atcc 824
|
Resolution | 2.10 Å |
|
 |
  |   |
452 | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
|
|
. | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | R | G | R | R | V | S | R | I | A | V | H | P | A | R | Q | R | E | G | T | G | R | Q | L | I | A | G | A | L | Q | Y | T | . |
. |
. |
Q | D | L | D | Y | L | S | V | S | F | G | Y | T | G | E | L | W | R | F | W | Q | R | C | G | F | V | L | V | R | M | G | N | H | R | E | A | S | S | G | C | Y | T | A | M |
Query Conservation |   |
  |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |
| . |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
D | N | R | F | C | X | F | R | X | K | I | Y | K | Q | G | K | S | I | N | T | Y | I | K | E | I | L | S | V | F | X | E | F | L | F | K | S | N | D | I | N | K | V | N | I | . |
I | V | D | E | E | V | S | T | Q | P | F | V | E | L | G | F | A | F | E | G | I | I | N | K | S | I | I | E | K | N | V | L | K | D | E |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  | . |  |  |  | T | T | S |
| S |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
  |   |
529 | 530 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | L | P | M | S | D | A |
Query Conservation |   |
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
Template Sequence |   |
F | L | F | G | X | D | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|