Job Description P76562 Confidence 89.35% Date Thu Jan 5 12:24:40 GMT 2012 Rank 244 Aligned Residues 66 % Identity 26% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240																					.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																		.	.	.										.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																		.	.	.										.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	G	R	A	I	V	T	A	P	A	.	.	.	.	.	.	.	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	F	I	A	P	D	A	L	L	.
Query Conservation																		.	.	.										.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																		.	.	.										.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		G	E	G	K	T	L	T	S	T	L	P	V	Y	L	N	A	L	T	G	K	G	V	H	V	V	T	V	N	E	Y	L	A	S	R	D	A	E	Q	M	G	K	I	F	E	F	L	G	L	T	V	G	L	N	L	N	S	M	S	K	D	E	K	R	E	A	Y	A	A	D	I	T	Y	S	T	N	N	E	L	G	F
Template Known Secondary structure		S	S		T													T	T	S	S							S												T							T	T					B			S	S			S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
															251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	L	R	D	N	M	V	L	Y	K	E	Q	M	V	Q	R	P	L	H	F	A	V	I	D	E	V	D	S	I
Template Known Secondary structure						T	T	T		S		S															T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions