Job Description P76562 Confidence 96.97% Date Thu Jan 5 12:24:40 GMT 2012 Rank 145 Aligned Residues 116 % Identity 22% Template c2zj2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1 Resolution 2.40 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	.	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		F	Y	P	P	Q	A	E	A	L	K	S	G	I	L	E	G	.	K	N	A	L	I	S	I	P	T	A	S	G	K	T	L	I	A	E	I	A	M	V	H	R	I	L	T	Q	G	G	K	A	V	Y	I	V	P	L	K	A	L	A	E	E	K	F	Q	E	F	Q	D	W	E	K	I	G	L	R	V	A	M	A	T
Template Known Secondary structure											T	T	T	G	G	G	T	.							S		G	G	G	T																		S							S	S	T	T	S								T	G	G	G	G	G	G	T
Template Predicted Secondary structure																		.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
												237	.	.	240	.	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	.	.	.	.	.	.	.	A	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	.	.	.	.	.	.	.	.	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V	Q	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	Y	D	S	K	D	E	W	L	G	K	Y	D	I	I	I	A	T	A	E	K	F	D	S	L	L	R	H	G	S	S	W	I	K	D	V	K	I	L	V	A	D	E	I	H	L	I	G	S	R	D	R	G	A	T	L	E	V	I	L	A	H	M	L	G	K	A	Q	I	I	G	L	S	A	T	I	G	N	P
Template Known Secondary structure		S			S				G	G	G	G	G		S																T		G	G	G	G	G								T	G	G	G	G	G		T	T	T												B	T	T	B										S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		292
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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