Job Description P76562 Confidence 97.29% Date Thu Jan 5 12:24:40 GMT 2012 Rank 131 Aligned Residues 102 % Identity 20% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	.	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	.	.	.	.
Query Conservation																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	M	S	P
Template Known Secondary structure		T	T									T	T	S		T	T	T	T												T	T									S											T	T	T	S										S															S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
			253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270									.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.
Query Sequence		.	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	.	.	.	.	.	.	.	.	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V	Q	G	Y	E
Query Conservation		.																			.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M	T	A	T	P	P	G	T	T
Template Known Secondary structure							S					S	S	T	T			S																T	T	S								S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions