Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence56.16%DateThu Jan 5 12:24:40 GMT 2012
Rank342Aligned Residues85
% Identity15%Templatec2w74B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein; PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
Resolution2.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190. ........200.........210........ .220.........230......
Predicted Secondary structure 

............








.....


......
Query SS confidence 











. . . . . . . . . . . .


























. . . . .

















. . . . . .
Query Sequence  QQQLLKQLMTMP. . . . . . . . . . . . PGVAAVTAARGRGKSALAGQLISRIAG. . . . . RAIVTAPAKASTDVLAQF. . . . . .
Query Conservation 
  

       ............    
















 
    ..... 
 



   

  

  ......
Alig confidence 











............


























.....

















......
Template Conservation 
  

  
                   




 







    
  
       


 



  
  
    
     
Template Sequence  QIAATERILWKIKSSFTAKNWSKPESGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSP
Template Known Secondary structure  TT

SSGGGS
TTSSTT
TT


GGG

TTST
Template Predicted Secondary structure 























Template SS confidence 















































































   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   237..240.........250... ......260....
Predicted Secondary structure  ..................






.........





Query SS confidence  . . . . . . . . . . . . . . . . . .
















. . . . . . . . .










Query Sequence  . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALLASD. . . . . . . . . EQADWLVVDEA
Query Conservation  ..................    
 
 


 
    .........   







Alig confidence  ..................
















.........










Template Conservation         
   
   
      


 



                  






Template Sequence  DSVNGSENTAGLKRNLDKDDNKIIVTTIQKLNNLMKAESDLPVYNQQVVFIFDEC
Template Known Secondary structure  T

SSS


TT
TT


S

GGGGSS
Template Predicted Secondary structure 





















Template SS confidence 






















































   356...360.........370.........380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions