Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence95.35%DateThu Jan 5 12:24:40 GMT 2012
Rank189Aligned Residues89
% Identity18%Templatec2vl7A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:xpd; PDBTitle: structure of s. tokodaii xpd4
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.. .......200.........210.........220.........230....... ..240..
Predicted Secondary structure 


..











...............


Query SS confidence 












. .












































. . . . . . . . . . . . . . .




Query Sequence  QQQLLKQLMTMPP. . GVAAVTAARGRGKSALAGQLISRIAGRAIVTAPAKASTDVLAQFA. . . . . . . . . . . . . . . GEKFR
Query Conservation 
  

        ..   
















 
     
 



   

  

   ...............   
 
Alig confidence 












..












































...............




Template Conservation 
      
   
      

 



 


   
  
          
 
  
  
   
   

            



Template Sequence  QAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGLKTGFLRANLKDKDVI
Template Known Secondary structure  TT


TTS
T
S
GGGT



TTGGG
S
Template Predicted Secondary structure 


























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   243......250.. .......260........
Predicted Secondary structure 

..............










Query SS confidence 









. . . . . . . . . . . . . .















Query Sequence  FIAPDALLAS. . . . . . . . . . . . . . DEQADWLVVDEAAAIP
Query Conservation 
 


 
   ..............    











Alig confidence 









..............















Template Conservation 
  
  
                       






 
 
Template Sequence  AMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIVIDEAHNLL
Template Known Secondary structure  TSS
SSTTS

GGGTTGGGGG
Template Predicted Secondary structure 











Template SS confidence 







































   149150.........160.........170.........180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions