Job Description P76562 Confidence 77.84% Date Thu Jan 5 12:24:40 GMT 2012 Rank 283 Aligned Residues 74 % Identity 27% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.												.	.	.	250	.	.
Predicted Secondary structure																															.	.	.	.							.	.															.								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.							.	.															.								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	.	.	.	.	A	I	V	T	A	P	.	.	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	.	K	F	R	F	I	A	P	.	.	.	.	.	.	.	.	.	.	.	D	A	L	L	A	S
Query Conservation																															.	.	.	.							.	.															.								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.							.	.															.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	N	V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K
Template Known Secondary structure		S										S	S	S	S	T	T																							S				T	T	G	G	G	S	S							S	S							S	S	S			S	S	S	T	T							T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	A	D	W	L	V	V	D	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	K	A	D	V	L	I	I	D	T	A
Template Known Secondary structure		T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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