Job Description P76562 Confidence 95.21% Date Thu Jan 5 12:24:40 GMT 2012 Rank 191 Aligned Residues 107 % Identity 19% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		Q	L	E	T	I	N	V	T	M	A	G	K	E	.	.	V	F	L	V	M	P	T	G	G	G	K	S	L	C	Y	Q	L	P	A	L	C	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q	L	M	V	L	K	Q	L	G	I	S	A	T	M	L	N	A	S	S	S	K	E	H	V	K	W	V
Template Known Secondary structure											T	T			.	.							T	T	S			T									S	S	S	S							S																T								S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
										237	.	.	240	.	.	.	.	.	.	.	.	.	250	.													.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.													.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	.	.	.	.	.	.	.	.	.	.	.	.	A	P	L	L	H	Q	L	V	S	R	F	P	R	T	L	L
Query Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	K	I	A	K	S	K	M	F	M	S	R	L	E	K	A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C	C	S	Q	W	G	H	D	F	R	P	D	Y	K	A	L	G	I	L	K	R	Q	F	P	N	A	S	L	I	G	L
Template Known Secondary structure								T	T										T					S														T	T									T	G	G	G	G	S	T	T	S	T	T			G	G	G	G	G	G								T	T	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		285	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	T	A
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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