|   |
349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | I | S | A | F | E | Q | T | L | W | Q | S | D | P | E | T | P | L | K | V | Y | Q | L | L | S | G | A | H | Y | R | T | S | P | L | D | L | R | R | M | M | D | A | P | G | Q | H | F | L | Q | A | A | G | E | N | E | I | A | G | A | L | W | L | V | D | E | G | G | L | S | Q | Q | L | S | Q | A | V | W | A | G |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   | . | . |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   | . | . | . | . |   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
V | S | I | R | Q | A | H | S | G | D | I | P | H | I | A | A | L | I | R | P | L | E | E | . |
. |
Q | G | I | L | L | H | R | S | R | E | Y | L | E | N | H | I | S | E | . |
. |
. |
. |
F | S | I | L | E | H | D | G | N | L | Y | G | C | A | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | S | S |
|
|
|
|  |  |  |  |  |  | S | G | G | G | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | |
|
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | |
|
|
|
. | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
429 | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
|
. | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | R | P | R | G | N | L | V | A | Q | S | L | A | A | H | G | N | N | P | L | A | A | T | L | R | G | R | R | V | S | R | I | A | V | H | P | A | R | Q | R | E | G | T | G | R | Q | L | I | A | G | A | L | Q | Y | T | . |
. |
Q | D | L | D | Y | L | S | V | S | F | G | Y | T | G | E | L | W | R | F | W | Q | R |
Query Conservation |   |
  |
|
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   | . | . |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
| . | . | . |   |
|   |
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | T | F | A | E | A | D | C | G | E | I | A | C | L | A | V | S | P | Q | A | Q | D | G | G | Y | G | E | R | L | L | A | H | I | I | D | K | A | R | G | I | G | I | S | R | L | . |
. |
. |
F | A | L | S | T | N | T | G | E | W | F | A | E |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  | . | . | . |  |  |  |  | S | S |
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
344 | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | |
|
|
. | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
  |
  |   |
507 | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 530 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | G | F | V | L | V | R | M | G | N | H | R | E | A | . |
. |
. |
. |
. |
. |
S | S | G | C | Y | T | A | M | A | L | L | P | M | S |
Query Conservation |   |
  |
|
|   |
|
|   |
|
|   |   |   |
|   | . | . | . | . | . | . |   |
|
|
|   |
|   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
Template Sequence |   |
R | G | F | Q | T | A | S | E | D | E | L | P | E | T | R | R | K | D | Y | R | S | N | G | R | N | S | H | I | L | V | R | R | L | H |
Template Known Secondary structure |   |
T | T |
|  |  |
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
  |