Job Description P76562 Confidence 96.78% Date Thu Jan 5 12:24:40 GMT 2012 Rank 152 Aligned Residues 115 % Identity 17% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																										.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		L	F	P	P	Q	A	E	A	V	E	K	V	F	S	G	.	.	K	N	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	G	G	K	S	L	Y	V	V	P	L	R	A	L	A	G	E	K	Y	E	S	F	K	K	W	E	K	I	G	L	R	I	G	I	S	T	G
Template Known Secondary structure					S	S	T							T	T		.	.	S							S	S																			T								S	S												G	G	G	G	T	T	T								S
Template Predicted Secondary structure																	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
											237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.												.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	.	.	.	.	.	.	.	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	.	.	.	.	.	.	.	.	.	.	.	A	P	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	E	S	R	D	E	H	L	G	D	C	D	I	I	V	T	T	S	E	K	A	D	S	L	I	R	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E	I	L	V	T	K	M	R	R	M	N	K	A	L	R	V	I	G	L	S	A	T	A	P
Template Known Secondary structure				S				T	T	G	G	G		S															T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T																T	T											T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		184	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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