Job Description P76562 Confidence 94.81% Date Thu Jan 5 12:24:40 GMT 2012 Rank 201 Aligned Residues 114 % Identity 17% Template c2oxcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20; PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp Resolution 1.30 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	.	.	.	.	.	.	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		P	S	P	V	Q	L	K	A	I	P	L	G	R	C	G	L	D	.	.	L	I	V	Q	A	K	S	G	T	G	K	T	C	V	F	S	T	I	A	L	D	S	L	V	L	E	N	L	S	T	Q	I	L	I	L	A	P	T	R	E	I	A	V	Q	I	H	S	V	I	T	A	I	G	I	K	M	E	G	L	E	C
Template Known Secondary structure															T	T			.	.							T	T	S	S															T	T	S		S								S	S															T	T	T	S	T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																		237	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																	.	.	.	.	.															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																	.	.	.	.	.															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	.	.	.	.	.	.	.	L	A	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	.	.	.	.	.	A	I	P	A	P	L	L	H	Q	L	V	S	R	F	.	.	.	.	P	R	T	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																	.	.	.	.	.															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		H	V	F	I	G	G	T	P	L	S	Q	D	K	T	R	L	K	K	C	H	I	A	V	G	S	P	G	R	I	K	Q	L	I	E	L	D	Y	L	N	P	G	S	I	R	L	F	I	L	D	E	A	D	K	L	L	E	E	G	S	F	Q	E	Q	I	N	W	I	Y	S	S	L	P	A	S	K	Q	M	L	A	V
Template Known Secondary structure						T	T	S									T	T	S		S															T	T	S	S		G	G	G							S	S						S	T	T	S	S											S		S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		285	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	T	V	Q	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	T	Y	P	E	F
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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