Job Description P76562 Confidence 45.52% Date Thu Jan 5 12:24:40 GMT 2012 Rank 373 Aligned Residues 98 % Identity 21% Template c2o8dB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair Resolution 3.00 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																						.																																.	.					.	.	.	.																		.
Query SS confidence																						.																																.	.					.	.	.	.																		.
Query Sequence		P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	.	L	I	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	F	R	.	.	F	I	A	P	.	.	.	.	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V	D	E	.
Query Conservation																						.																																.	.					.	.	.	.																		.
Alig confidence																						.																																.	.					.	.	.	.																		.
Template Conservation
Template Sequence		A	Y	C	V	L	V	T	G	P	N	M	G	G	K	S	T	L	M	R	Q	A	G	L	L	A	V	M	A	Q	M	G	C	Y	V	P	A	E	V	C	R	L	T	P	I	D	R	V	F	T	R	L	G	S	T	F	F	V	E	L	S	E	T	A	S	I	L	M	H	A	T	A	H	S	L	V	L	V	D	E	L
Template Known Secondary structure								B			T	T	S	S																T	T	T			B	S	S	S								S	B																									T	T								S
Template Predicted Secondary structure
Template SS confidence
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.
										264	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	A	A	A	I	P	A	P	L	L	H	Q	L	V	S	R	.	F	P	R	T	L	L	T	T	T	V	Q
Query Conservation		.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		G	R	G	T	A	T	F	D	G	T	A	I	A	N	A	V	V	K	E	L	A	E	T	I	K	C	R	T	L	F	S	T	H	Y	H
Template Known Secondary structure			T	T	S																			T	S
Template Predicted Secondary structure
Template SS confidence
		1216	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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