Job Description P76562 Confidence 57.20% Date Thu Jan 5 12:24:40 GMT 2012 Rank 333 Aligned Residues 99 % Identity 12% Template c2o8bA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair Resolution 2.75 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																						.																															.	.	.	.	.	.																							.
Query SS confidence																						.																															.	.	.	.	.	.																							.
Query Sequence		P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	.	L	I	S	R	I	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	F	.	.	.	.	.	.	R	F	I	A	P	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V	D	E	.
Query Conservation																						.																															.	.	.	.	.	.																							.
Alig confidence																						.																															.	.	.	.	.	.																							.
Template Conservation
Template Sequence		Q	M	F	H	I	I	T	G	P	N	M	G	G	K	S	T	Y	I	R	Q	T	G	V	I	V	L	M	A	Q	I	G	C	F	V	P	C	E	S	A	E	V	S	I	V	D	C	I	L	A	R	V	G	S	T	F	M	A	E	M	L	E	T	A	S	I	L	R	S	A	T	K	D	S	L	I	I	I	D	E	L
Template Known Secondary structure		S								S	T	T	S	S																	T	T			B	S	S	S								S																						T	T			T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
										264	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	A	A	A	I	P	A	P	L	L	H	Q	L	V	S	R	.	F	P	R	T	L	L	T	T	T	V	Q	G
Query Conservation		.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		G	R	G	T	S	T	Y	D	G	F	G	L	A	W	A	I	S	E	Y	I	A	T	K	I	G	A	F	C	M	F	A	T	H	F	H	E
Template Known Secondary structure				S	S																			T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		751	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions