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Job DescriptionP76562
Confidence97.17%DateThu Jan 5 12:24:40 GMT 2012
Rank139Aligned Residues99
% Identity22%Templatec2f55C_
PDB info PDB header:hydrolase/dnaChain: C: PDB Molecule:polyprotein; PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230...... ...240.........250..
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Query Sequence  PGVAAVTAARGRGKSALAGQLISRIAGRAIVTAPAKASTDVLAQF. . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALLAS
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Template Sequence  FQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGIDPNIRTGVRTITTGGSITYSTYGKFLAD
Template Known Secondary structure 
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   197..200.........210.........220.........230.........240.........250.........260.........270......
 
   253. .....260.........270. ........280 .........290
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Query Sequence  DE. . . . QADWLVVDEAAAIPAPL. . . . . . LHQLVSRFP. . . RTLLTTTVQG
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Template Sequence  GGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLATATPPG
Template Known Secondary structure  TSSSTT

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   277..280.........290.........300.........310.........320.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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