Job Description P76562 Confidence 29.94% Date Thu Jan 5 12:24:40 GMT 2012 Rank 456 Aligned Residues 255 % Identity 10% Template c2djiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	T	A	L	H	T	L	T	A	Q	M	K	R	E	G	I	R	R	L	L	V	L	S	G	E	E	G	W	C	F	E	H	T	L	K	L	R	D	A	L	P	G	D	W	L	W	I	S	P	R	P	D	A	E	N	H	C	S	P	S	A	L	Q	T	L	L	G	R	E	F	R	H	A	V	F	D	A	R
Query Conservation
Alig confidence																																.	.																								.	.
Template Conservation																																.	.																								.	.
Template Sequence		N	K	I	N	I	G	L	A	V	M	K	I	L	E	S	W	G	A	D	T	I	Y	G	I	P	S	G	T	L	S	.	.	S	L	M	D	A	M	G	E	E	E	N	N	V	K	F	L	Q	V	K	H	E	E	V	.	.	G	A	M	A	A	V	M	Q	S	K	F	G	G	N	L	G	V	T	V	G	S	G	G
Template Known Secondary structure																	T	T										T	T	T		.	.				T	T	S	S	S	T	T									S	S				.	.											T	T										T	T
Template Predicted Secondary structure																																.	.																								.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	F	D	A	A	A	F	A	A	L	S	G	T	L	K	A	G	S	W	L	V	L	L	L	.	.	P	V	W	E	E	W	E	N	Q	P	D	A	D	.	.	.	.	.	.	.	.	.	.	S	L	R	W	S	D	C	P	D	P	I	A	T	P	H	F	V	Q	H	L	K	R	V	L	T	A	D	N	E	A
Query Conservation																											.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence				.																							.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		P	G	.	A	S	H	L	I	N	G	L	Y	D	A	A	M	D	N	I	P	V	V	A	I	L	G	S	R	P	Q	R	E	L	N	M	D	A	F	Q	E	L	N	Q	N	P	M	Y	D	H	I	A	V	Y	N	R	R	V	A	Y	A	E	Q	L	P	K	L	V	D	E	A	A	R	M	A	I	A	K	R	G	V
Template Known Secondary structure				.			T	T											T										S		G	G	G	T	T	T	T		T	T										T	T		S							S	G	G	G															T	T	S
Template Predicted Secondary structure				.
Template SS confidence
		80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure						.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.
Query Sequence		I	L	W	R	.	.	.	.	.	.	.	Q	N	Q	P	F	S	L	A	H	F	T	P	R	T	D	W	Y	P	A	T	G	A	P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	A	I	V
Query Conservation						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	L	E	V	P	G	D	F	A	K	V	E	I	D	N	D	Q	W	Y	S	S	A	N	S	L	R	K	Y	A	P	I	A	P	A	A	Q	D	I	D	A	A	V	E	L	L	N	N	S	K	R	P	V	I	Y	A	G	I	G	T	M	G	H	G	P	A	V	Q	E	L	A	R	K	I	K	A	P	V	I	T
Template Known Secondary structure								T	T	G	G	G					G	G	G					G	G	G																							T		S	S							G	G	G	T	T													T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	K	N	F	E	T	F	E	W	D	F	E	A	L	T	G	S	T	Y	R	V	G	W	K	P	A	N	E	T	I	L	E	A	D	T	V	L	F
Template Known Secondary structure			T	T		G	G	G	S		T	T		T	T	B				S	S	S	S	S												S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions