Job Description P76562 Confidence 51.74% Date Thu Jan 5 12:24:40 GMT 2012 Rank 355 Aligned Residues 93 % Identity 22% Template c2c99A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf Resolution 1.9 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure															.	.																											.	.	.	.	.
Query SS confidence															.	.																											.	.	.	.	.
Query Sequence		Q	Q	L	L	K	Q	L	M	T	M	P	P	G	.	.	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	.	.	.	.	.	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	D
Query Conservation															.	.																											.	.	.	.	.
Alig confidence															.	.																											.	.	.	.	.																																.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		L	E	V	L	E	Q	V	S	H	L	A	P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S	E	L	F	G	H	E	A	K	R	H	P	G	R	F	E	R	A	.	.	.
Template Known Secondary structure												T	T	S		S								T	T	S	S											T	S	T	T	T	T	S							G	G	G	S												B					B							T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	L	L	H	Q	L	V	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R
Template Known Secondary structure		.	T	T	S						S	G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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