Job Description P76562 Confidence 36.58% Date Thu Jan 5 12:24:40 GMT 2012 Rank 412 Aligned Residues 110 % Identity 24% Template c1wp9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent rna helicase, putative; PDBTitle: crystal structure of pyrococcus furiosus hef helicase domain Resolution 2.90 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	P	E	Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	.	.	.	.	A	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		P	R	I	Y	Q	E	V	I	Y	A	K	C	K	E	.	.	.	T	N	C	L	I	V	L	P	T	G	L	G	K	T	L	I	A	M	M	I	A	E	Y	R	L	T	K	Y	G	G	K	V	L	M	L	A	P	T	K	P	L	V	L	Q	H	A	E	S	F	R	R	L	F	N	L	P	P	E	K	I	V	A	L
Template Known Secondary structure													G	G	G	.	.	.	S								T	T	S																	S		S							S	S															B		S		G	G	G
Template Predicted Secondary structure																.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
															237	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	.	.	.	.	.	.	.	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	.	.	.	.	.	.	.	.	A	P	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	E	K	S	P	E	E	R	S	K	A	W	A	R	A	K	V	I	V	A	T	P	Q	T	I	E	N	D	L	L	A	G	R	I	S	L	E	D	V	S	L	I	V	F	D	E	A	H	R	A	V	G	N	Y	A	Y	V	F	I	A	R	E	Y	K	R	Q	A	K	N	P	L	V	I	G	L	T	A	S	P
Template Known Secondary structure			S		S													S															T	T	S			T	T	S		S						T	G	G	G		S	T	T															S	S								S		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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