Job Description P76562 Confidence 36.74% Date Thu Jan 5 12:24:40 GMT 2012 Rank 409 Aligned Residues 110 % Identity 14% Template c1sxjD_ PDB info PDB header:replication Chain: D: PDB Molecule:activator 1 41 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.
Predicted Secondary structure																.	.	.	.																									.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																.	.	.	.																									.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		Q	Q	Q	L	L	K	Q	L	M	T	M	P	P	G	.	.	.	.	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	.	.	.	.	G	R	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	.	.	.	.	.	G	E	K	F	R	F
Query Conservation																.	.	.	.																									.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																.	.	.	.																									.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		Q	D	H	A	V	T	V	L	K	K	T	L	K	S	A	N	L	P	H	M	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	L	A	L	T	K	E	L	Y	G	P	D	L	M	K	S	R	I	L	E	L	N	A	S	D	E	R	G	I	S	I	V	R	E	K	V	K	N	F	A	R	L	T	V	S	K	P
Template Known Secondary structure				T	T								T	T		T	T									S	T	T	S	S																			T	T	S						S	S	S								T	T								S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		I	A	P	D	A	L	L	A	S	D	E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	.	.	.	.	L	L	H	Q	L	V	S	R	F	P	R	T	L	L	T	T	T	V	Q
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.
Template Conservation
Template Sequence		S	K	H	D	L	E	N	Y	P	C	P	P	Y	K	I	I	I	L	D	E	A	D	S	M	T	A	D	A	Q	S	A	L	R	R	T	M	E	T	Y	S	G	V	T	R	F	C	L	I	C	N
Template Known Secondary structure			T	T					S				S							T	T	G	G	G	S															T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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