Job Description P76562 Confidence 27.18% Date Thu Jan 5 12:24:40 GMT 2012 Rank 485 Aligned Residues 97 % Identity 23% Template c1ojlF_ PDB info PDB header:response regulator Chain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding Resolution 3.0 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure															.	.																											.	.	.	.	.
Query SS confidence															.	.																											.	.	.	.	.
Query Sequence		Q	Q	L	L	K	Q	L	M	T	M	P	P	G	.	.	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	G	R	.	.	.	.	.	A	I	V	T	A	P	A	K	A	S	T	D	V	L	A	Q	F	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	S	D
Query Conservation															.	.																											.	.	.	.	.
Alig confidence															.	.																											.	.	.	.	.
Template Conservation
Template Sequence		Q	H	L	L	N	E	I	A	M	V	A	P	S	D	A	T	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	L	H	A	C	S	A	R	S	D	R	P	L	V	T	L	N	C	A	A	L	N	E	S	L	L	E	S	E	L	F	G	H	E	K	G	A	F	T	K	R	R	E	G	R	F	V	E
Template Known Secondary structure													S	T	T									T	T	S	S												S	S		S	S	S								T	T											T				S	S	S								T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	D	W	L	V	V	D	E	A	A	A	I	P	A	P	L	L	H	Q	L	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	G	G	T	L	F	L	D	E	I	G	D	I	S	P	L	M	Q	V	R	L	L	R
Template Known Secondary structure		G	T	T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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