Return to main results Retrieve Phyre Job Id

Job DescriptionP76562
Confidence71.86%DateThu Jan 5 12:24:40 GMT 2012
Rank300Aligned Residues99
% Identity18%Templatec1fnnB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180......... 190.........200.........210......... 220.........230.........240.....
Predicted Secondary structure  .......










.....







Query SS confidence 











. . . . . . .





























. . . . .

























Query Sequence  PEQQQLLKQLMT. . . . . . . MPPGVAAVTAARGRGKSALAGQLISRIAGR. . . . . AIVTAPAKASTDVLAQFAGEKFRFIA
Query Conservation   

  

     .......      
















 
     .....
 



   

  

      
 
 
Alig confidence 











.......





























.....

























Template Conservation    

  
   
             
 
 
  
 


 

   
  
                             
    
Template Sequence  EQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPF
Template Known Secondary structure  S
BSS



TTSSTTS


TTT

ST


Template Predicted Secondary structure 

























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   246. ..250.........260.........270......
Predicted Secondary structure  .............











Query SS confidence 

. . . . . . . . . . . . .




























Query Sequence  PD. . . . . . . . . . . . . ALLASDEQADWLVVDEAAAIPAPLLHQLV
Query Conservation 

............. 
       











 
 
  

Alig confidence 

.............




























Template Conservation                               
            
 
Template Sequence  PRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFI
Template Known Secondary structure 
SS


TT

TGGGS
Template Predicted Secondary structure 
















Template SS confidence 











































   102.......110.........120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions