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Job DescriptionP76562
Confidence97.64%DateThu Jan 5 12:24:40 GMT 2012
Rank118Aligned Residues97
% Identity25%Templatec1a1vA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220.........230...... ...240.........250 .
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Query Sequence  VAAVTAARGRGKSALAGQLISRIAGRAIVTAPAKASTDVLAQF. . . . . . . . . . . . . . . . . . . AGEKFRFIAPDALL. . . A
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Template Sequence  VAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGKFLADGG
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   252.......260.........270. ........280. ........290
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Query Sequence  SDEQADWLVVDEAAAIPAPL. . . . . . LHQLVSRFPR. . . TLLTTTVQG
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Template Sequence  SGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATPPG
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   280.........290.........300.........310.........320.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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