Job Description P0A9D4 Confidence 99.90% Date Thu Jan 5 11:09:56 GMT 2012 Rank 11 Aligned Residues 164 % Identity 20% Template d3tdta_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.
Predicted Secondary structure																																																						.																	.	.	.	.	.
Query SS confidence																																																						.																	.	.	.	.	.
Query Sequence		A	S	A	A	C	D	I	Q	A	V	R	T	R	D	P	A	V	D	K	Y	S	T	P	L	L	Y	L	K	G	F	H	A	L	Q	A	Y	R	I	G	H	W	L	W	N	Q	G	R	R	A	L	A	I	.	F	L	Q	N	Q	V	S	V	T	F	Q	V	D	I	H	P	.	.	.	.	.	A	A	K	I	G	R
Query Conservation																																																						.																	.	.	.	.	.
Alig confidence																																																						.																	.	.	.	.	.
Template Conservation
Template Sequence		Q	W	L	K	K	A	V	L	L	S	F	R	I	N	D	N	K	V	M	D	G	A	E	T	R	Y	Y	D	K	V	P	M	K	F	A	D	Y	D	E	A	R	F	Q	K	E	G	F	R	V	V	P	P	A	T	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	P	S	Y	V	N	I	G	A	Y	V	D	E
Template Known Secondary structure																							S	S	S					S	S		B	T	T	T	T															T	T				B	T	T					T	T					S					T	T					T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	M	L	D	H	A	T	G	I	V	V	G	E	T	A	V	I	E	N	D	V	S	I	L	Q	S	V	T	L	G	G	T	G	K	S	G	G	D	R	H	P	K	I	R	E	G	V	M	I	G	A	G	A	K	I	L	G	N	I	E	V	G	R	G	A	K	I	G	A	G	S	V	V	L	Q	P	V	P	P
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		G	T	M	V	D	T	.	.	W	A	T	V	G	S	C	A	Q	I	G	K	N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	L	G	Q	S	T	R	I
Template Known Secondary structure		T					T	.	.	T					T	T					T	T					T	T						S	B	T	T	B		S	S						T	T					T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		137	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		233	.	.	.	.	.							.	240	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		H	T	T	A	A	G	.	.	.	.	.	.	V	P	A	R	I	V
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V
Template Known Secondary structure				T	T	T					S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions