Job Description P0A9D4 Confidence 99.87% Date Thu Jan 5 11:09:56 GMT 2012 Rank 20 Aligned Residues 144 % Identity 21% Template d3bswa1 SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes PglD-like Resolution 1.77

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	V	D	K	Y	S	T	P	L	L	Y	L	K	G	F	H	A	L	Q	A	Y	R	I	G	H	W	L	W	N	Q	G	R	R	A	L	A	I	F	L	Q	N	Q	V	S	V	T	F	Q	V	D	I	H	P	A	A	K	I	G	R	G	I	M	L	D	H	A	T	G	I	V	V	G	E	T	A	V	I	E
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	K	G	M	K	F	E	S	T	L	P	K	Y	D	F	F	I	A	I	G	N	N	E	I	R	K	K	I	Y	Q	.	.	.	.	.	.	.	.	.	K	I	S	E	N	G	F	K	I	V	N	L	I	H	K	S	A	L	I	S	P	S	A	I	V	E	E	N	A	G	I	L	I	M	P	Y	V	V	I	N
Template Known Secondary structure				T	T	G	G	G	G	G	G	S										S											.	.	.	.	.	.	.	.	.					T	T			B						T	T					T	T	S				T	T	S						T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	V	S	I	L	Q	S	V	T	L	G	G	T	G	K	S	G	G	D	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	I	R	E	G	V	M	I	G	A	G	A	K	I	L	G	N	I	E	V	G	R	G	A	K	I	G	A	G	S	V	V	L	Q	P	V	P	P	H	T	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	A	K	I	E	K	G	V	I	L	N	T	S	S	V	I	E	H	E	C	V	I	G	E	F	S	H	V	S	V	G	A	K	C	A	G	N	V	K	I	G	K	N	C	F	L	G	I	N	S	C	V	L	P	N	L	S	L	A	D	D	S	I	L	G	G	G	A	T	L	V	K	N	Q	D	E	K	G	V
Template Known Secondary structure		T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					S		B		S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	V	P	A	R	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	G	V	P	A	K	R	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions