Job Description P0A9D4 Confidence 99.88% Date Thu Jan 5 11:09:56 GMT 2012 Rank 16 Aligned Residues 125 % Identity 24% Template d1mr7a_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like Resolution 1.80

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	H	P	A	A	K	I	G	R	G	I	M	L	D	H	A	T	G	I	V	.	.	.	.	.	.	.	.	.	.	.	V	G	E	T	A	V	I	E	N	D	V	S	I	L	Q	S	V	T	L	G	G	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	L	E	N	V	E	V	G	E	Y	S	Y	Y	D	S	K	N	G	E	T	F	D	K	Q	I	L	Y	H	Y	P	I	L	N	D	K	L	K	I	G	K	F	C	S	I	G	P	G	V	T	I	I	M	N	G	A	N	H	R	M	D	G	S	T	Y	P	F	N	L	F	G	N	G	W	E	K	H	M	P
Template Known Secondary structure			T	T	S	T	T					T	T						S	S	S			G	G	G	G			S			G	G	G								S	S					T	T						G	G	G					S	S					G	G	G	G		T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
					187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	S	G	G	D	R	H	P	K	I	R	E	G	V	M	I	G	A	G	A	K	I	L	G	N	I	E	V	G	R	G	A	K	I	G	A	G	S	V	V	L	Q	P	V	P	P	H	T	T	A	A	G	V	P	A	R	I	V	G	K	P	D	S	D	K	P	S	M	D	M	D	Q	H	F	N	G	I
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																										.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	L	D	Q	L	P	I	K	G	D	T	I	I	G	N	D	V	W	I	G	K	D	V	V	I	M	P	G	V	K	I	G	D	G	A	I	V	A	A	N	S	V	V	V	K	D	I	A	P	Y	M	L	A	G	G	N	P	A	N	E	I	K	Q	R	F	D	Q	D	T	I	N	Q	L	L	D	I	.	.	.	.
Template Known Secondary structure			G	G	G	S										S	S					T	T					T	T					T	T					T	T					S		B		T	T						T	T							S	S												.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	T	F	E	Y	G	D
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	W	W	N	W	P	I
Template Known Secondary structure		.		G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			180	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions