Job Description P0A9D4 Confidence 6.15% Date Thu Jan 5 11:09:56 GMT 2012 Rank 76 Aligned Residues 62 % Identity 16% Template c4a1aP_ PDB info PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l21; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. Resolution 3.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.
Predicted Secondary structure																																		.																									.
Query SS confidence																																		.																									.
Query Sequence		Y	L	K	G	F	H	A	L	Q	A	Y	R	I	G	H	W	L	W	N	Q	G	R	R	A	L	A	I	F	L	Q	N	Q	.	V	S	V	T	F	Q	V	D	I	H	P	A	A	K	I	G	R	G	I	M	L	D	H	A	.	T	G	I	V	V	G
Query Conservation																																		.																									.
Alig confidence																																		.																									.
Template Conservation
Template Sequence		H	S	Y	G	Y	R	R	Q	T	R	K	K	F	A	K	A	Y	K	T	K	G	H	V	R	I	S	R	Y	L	T	T	Y	K	V	G	E	Y	V	D	I	M	V	D	G	S	Q	H	K	G	M	P	Y	K	L	Y	H	G	R	T	G	K	V	F	N
Template Known Secondary structure						T	T	T	T						S			T	T		T	T													T	T									S	S			T	T				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions