 |
Job Description | P0A9D4 | Confidence | 98.56% | Date | Thu Jan 5 11:09:56 GMT 2012 |
Rank | 54 | Aligned Residues | 87 |
% Identity | 21% | Template | c3brkX_ |
PDB info |
PDB header:transferase | Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; |
PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens
|
Resolution | 2.10 Å |
|
 |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
. | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
|
. | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
| . | . |  |  |  |  |
|
|
|
|  |  |
|
| . | . | . | . |
|
|  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Q | V | D | I | H | P | A | A | K | I | G | R | G | I | M | L | D | H | A | T | . |
. |
G | I | V | V | G | E | T | A | V | I | E | N | . |
. |
. |
. |
D | V | S | I | L | Q | S | V | T | L | G | G | T | G | K | S | G | G | D | R | H | P | K | I | R | E | G | V | M | I | G | A | G | A | K | I | L | G | N | I | E |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |
|
|
|
|   | . | . |
|
|
|
|
|   |   |
|   |
|
|   | . | . | . | . |   |
|   |
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |
| . | . | . |
|
|
|   |   |   |   |   |
|
|   |   |   |   |
|   | . |   |
|
|
Template Sequence |   |
T | Y | A | E | I | T | P | P | A | K | F | V | H | D | D | E | D | R | R | G | S | A | V | S | S | V | V | S | G | D | C | I | I | S | G | A | A | L | N | R | S | L | L | F | T | G | V | R | A | N | S | Y | S | R | L | E | N | . |
. |
. |
A | V | V | L | P | S | V | K | I | G | R | H | A | Q | L | S | . |
N | V | V |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |
| B |
| S | S |
| B |
|  |  |  | S |
|  |  |
| S | S |
|  |  |  | S |
|  |  |  | S |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |  |  | . | . | . |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |  | . |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |
|
|  |  |  |  |
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
|
|
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | |
. | . | . |
  |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | R | G | A | K | I | G | A | G | S | V | V | L | Q | P | V |
Query Conservation |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
I | D | H | G | V | V | I | P | E | G | L | I | V | G | E | D | P |
Template Known Secondary structure |   |
 |
| T | T |
|  |  |
| T | T |
|  |  | S | S |
|  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|