Job Description P0A9D4 Confidence 8.65% Date Thu Jan 5 11:09:56 GMT 2012 Rank 65 Aligned Residues 58 % Identity 14% Template c3bitA_ PDB info PDB header:transcription Chain: A: PDB Molecule:fact complex subunit spt16; PDBTitle: crystal structure of yeast spt16 n-terminal domain Resolution 1.90 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																	.	.	.	.																																									.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																	.	.	.	.																																									.	.	.	.	.	.	.	.											.	.	.
Query Sequence		L	D	H	A	T	G	I	V	V	G	E	T	A	V	I	.	.	.	.	E	N	D	V	S	I	L	Q	S	V	T	L	G	G	T	G	K	S	G	G	D	R	H	P	K	I	R	E	G	V	M	I	G	A	G	A	K	I	L	G	.	.	.	.	.	.	.	.	N	I	E	V	G	R	G	A	K	I	.	.	.
Query Conservation																	.	.	.	.																																									.	.	.	.	.	.	.	.											.	.	.
Alig confidence																	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	S	L	I	G	L	E	F	R	D	S	N	F	I	L	N	V	K	N	D	Y	R	K	I	Q	R	G	D	C	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	F	G	F	N	N	L	K	D	S	Q	S	A	N	N	Y	A	L	Q	L	A	D	T	V	Q	I	P	L	D
Template Known Secondary structure							S	S	S	S	S		T	T	S	B	S	S	T	T			S					T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T																S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
			221	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	A	G	S	V	V	L	Q	P	V	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	T	E	P	P	R	F	L	T	N	Y	T
Template Known Secondary structure		T	T	S					S			S
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions