Job Description P0A9D4 Confidence 6.86% Date Thu Jan 5 11:09:56 GMT 2012 Rank 72 Aligned Residues 63 % Identity 19% Template c2zkrq_ PDB info PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																									.
Query SS confidence																																	.																									.
Query Sequence		L	K	G	F	H	A	L	Q	A	Y	R	I	G	H	W	L	W	N	Q	G	R	R	A	L	A	I	F	L	Q	N	Q	.	V	S	V	T	F	Q	V	D	I	H	P	A	A	K	I	G	R	G	I	M	L	D	H	A	.	T	G	I	V	V	G	E	T
Query Conservation																																	.																									.
Alig confidence																																	.																									.
Template Conservation
Template Sequence		T	K	G	K	R	R	G	T	R	Y	M	F	S	R	P	F	R	K	H	G	V	V	P	L	A	T	Y	M	R	I	Y	K	K	G	D	I	V	D	I	K	G	M	G	T	V	Q	K	G	M	P	H	K	C	Y	H	G	K	T	G	R	V	Y	N	V	T
Template Known Secondary structure				S	S	S	T	T						S			T	T	T		S													T	T									T	T			S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions