Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9D4
Confidence99.33%DateThu Jan 5 11:09:56 GMT 2012
Rank44Aligned Residues92
% Identity15%Templatec2rijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative 2,3,4,5-tetrahydropyridine-2-carboxylate n- PDBTitle: crystal structure of a putative 2,3,4,5-tetrahydropyridine-2-2 carboxylate n-succinyltransferase (cj1605c, dapd) from campylobacter3 jejuni at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160... ......170.........180.........190.........200
Predicted Secondary structure 









...............



























Query SS confidence 



























. . . . . . . . . . . . . . .




































Query Sequence  VSVTFQVDIHPAAKIGRGIMLDHATGIV. . . . . . . . . . . . . . . VGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGV
Query Conservation       





 
 

 
  



 


...............

  
 

  
 
   



         

 


 
Alig confidence 



























...............




































Template Conservation 



 

 

 



  

 








 



 
 
  





 
 

 
  






 





 
 

 




Template Sequence  TRILESSKVRXGASLAAGTTIXPGASYVNFNAGTTGACXVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKAC
Template Known Secondary structure 
S
GGGBBTT
B

TT

SSS

TT
SS


S
TT

TT

TT


B
SSTT

B

TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   201........210.........220.........
Predicted Secondary structure 
















Query SS confidence 




























Query Sequence  MIGAGAKILGNIEVGRGAKIGAGSVVLQP
Query Conservation   




 


 
 

  
 






 

Alig confidence 





..




















Template Conservation   




..  

 


 






 
 
 
Template Sequence  LLGANS. . VTGIPLGDNCIVDAGIAVLEG
Template Known Secondary structure 
TT
..
S
B
TT

TT

TT
Template Predicted Secondary structure 



..











Template SS confidence 




























   297..300.. .......310.........320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions