Job Description P0AA53 Confidence 58.38% Date Thu Jan 5 11:11:56 GMT 2012 Rank 5 Aligned Residues 89 % Identity 19% Template c3u5gB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s1-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																											.	.
Query SS confidence																					.	.																																											.	.
Query Sequence		Q	E	V	I	S	K	D	N	A	N	V	T	I	D	A	V	C	F	I	.	.	Q	V	I	D	A	P	R	A	A	Y	E	V	S	N	L	E	L	A	I	I	N	L	T	M	T	N	I	R	T	V	L	G	S	M	E	L	D	E	M	L	S	Q	.	.	R	D	S	I	N	S	R	L	L	R	I	V	D	E	A
Query Conservation																					.	.																																											.	.
Alig confidence																					.	.																																											.	.
Template Conservation
Template Sequence		V	T	V	K	T	S	D	D	Y	V	L	R	I	F	A	I	A	F	T	R	K	Q	A	N	Q	V	K	R	H	S	Y	A	Q	S	S	H	I	R	A	I	R	K	V	I	S	E	I	L	T	K	E	V	Q	G	S	T	L	A	Q	L	T	S	K	L	I	P	E	V	I	N	K	E	I	E	N	A	T	K	D	I
Template Known Secondary structure							S	S	S															T	T			S	S																										S	S										T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	W	G	I	K	V	T	R	I	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	L	Q	N	I	H	V	R	K	V	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions