Job Description P0AA53 Confidence 7.61% Date Thu Jan 5 11:11:56 GMT 2012 Rank 23 Aligned Residues 99 % Identity 15% Template c3lj5H_ PDB info PDB header:viral protein Chain: H: PDB Molecule:portal protein; PDBTitle: full length bacteriophage p22 portal protein Resolution 7.50 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		N	S	R	L	L	R	I	V	D	E	A	T	N	P	W	G	I	K	V	T	R	I	E	I	R	D	V	R	P	P	A	E	L	I	S	S	M	N	A	Q	M	K	A	E	R	T	K	R	A	Y	I	L	E	A	E	G	I	R	Q	A	E	I	L	K	A	E	G	E	K	Q	S	.	.	.	.	.	.	Q	I	L
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		V	E	M	M	R	D	Y	A	N	K	Q	L	I	Q	M	G	V	.	.	.	.	.	.	.	.	.	K	K	P	E	T	P	E	E	Q	Q	W	L	V	E	A	Q	Q	A	K	Q	G	Q	Q	D	P	A	M	V	Q	A	Q	G	V	L	L	Q	G	Q	A	E	L	A	K	A	Q	N	Q	T	L	S	L	Q	I	D
Template Known Secondary structure																	T		.	.	.	.	.	.	.	.	.	S					S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.										.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	G	E	R	Q	S	A	F	L	Q	A	E	A	R	E	R	S	A	E	A	E	A	R	A	T	K	M	V	S	E	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	V	E	A	Q	N	Q	L	N	A	A	R	I	A	E	I	F	N	N	M	D	L	S	K	Q	S	E	F	R	E	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions