Job Description P0AA53 Confidence 43.25% Date Thu Jan 5 11:11:56 GMT 2012 Rank 6 Aligned Residues 89 % Identity 11% Template c2xzm4_ PDB info PDB header:ribosome Chain: 4: PDB Molecule:40s ribosomal protein s3a; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.	.	.	.	.																																										.	.
Query SS confidence																						.	.	.	.	.																																										.	.
Query Sequence		Q	E	V	I	S	K	D	N	A	N	V	T	I	D	A	V	C	F	I	Q	.	.	.	.	.	V	I	D	A	P	R	A	A	Y	E	V	S	N	L	E	L	A	I	I	N	L	T	M	T	N	I	R	T	V	L	G	S	M	E	L	D	E	M	L	S	Q	.	.	R	D	S	I	N	S	R	L	L	R	I	V
Query Conservation																						.	.	.	.	.																																										.	.
Alig confidence																						.	.	.	.	.																																										.	.
Template Conservation
Template Sequence		V	D	C	K	T	N	D	G	Y	I	I	R	V	F	T	L	A	F	T	K	K	T	S	A	G	K	Q	S	S	T	S	T	C	Y	A	K	S	S	Q	V	R	A	I	R	R	K	I	N	T	F	I	T	N	E	A	A	K	L	G	I	A	E	F	S	K	N	L	I	G	E	D	Y	T	K	K	I	E	K	E	T
Template Known Secondary structure							T	T	T															S	S			S		S	S			B			T																					T												T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	T	N	P	W	G	I	K	V	T	R	I	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	I	F	P	L	Q	N	I	T	I	R	K	V	K	V
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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