Job Description P0AA53 Confidence 3.94% Date Thu Jan 5 11:11:56 GMT 2012 Rank 87 Aligned Residues 54 % Identity 15% Template c2qggA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:16s rrna-processing protein rimm; PDBTitle: x-ray structure of the protein q6f7i0 from acinetobacter2 calcoaceticus amms 248. northeast structural genomics3 consortium target asr73. Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	G	A	G	V	K	I	V	P	Q	G	Y	Q	W	T	V	E	R	F	G	R	Y	T	K	T	L	Q	P	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	P	F	M	D	R	I	G	R	K	I	N	M	M	E	Q	V	L	D	I	P	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		L	K	G	L	T	V	L	G	L	D	D	E	E	Q	E	V	N	L	.	.	G	Q	I	H	E	L	F	E	T	G	A	N	D	V	X	V	V	R	A	T	P	D	S	I	D	S	E	E	R	X	I	P	W	H	K	D	V	V	Q	R	V	D	L	E	A	G	R	I	Y	V	N	W
Template Known Secondary structure			T	T								T	T	S						.	.										S	S										S	S	S	S	S	S									T	T	T						T	T	T	T					S
Template Predicted Secondary structure																				.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions