Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA53
Confidence10.50%DateThu Jan 5 11:11:56 GMT 2012
Rank15Aligned Residues46
% Identity15%Templatec2k88A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:vacuolar proton pump subunit g; PDBTitle: association of subunit d (vma6p) and e (vma4p) with g2 (vma10p) and the nmr solution structure of subunit g (g1-3 59) of the saccharomyces cerevisiae v1vo atpase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.......
Predicted Secondary structure 
Query SS confidence 













































Query Sequence  MNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQS
Query Conservation 
     
     
    

 
       
          
 
    
Alig confidence 













































Template Conservation 

 

 


 
  

 



 
  


 

 

  


 

 


 
Template Sequence  IATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDK
Template Known Secondary structure  SST
Template Predicted Secondary structure 
Template SS confidence 













































   8.10.........20.........30.........40.........50...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions