Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA53
Confidence4.87%DateThu Jan 5 11:11:56 GMT 2012
Rank68Aligned Residues30
% Identity27%Templatec1v06A_
PDB info PDB header:dna-binding proteinChain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: axh domain of the transcription factor hbp1 from m.musculus
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170...
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  DEATNPWGIKVTRIEIRDVRPPAELISSMN
Query Conservation     
   

 
  
 
  
  
     

 
Alig confidence 





























Template Conservation    
   


 
  
 






  
     
Template Sequence  SLTVVQHGIPCCEIHIGDVCLPPGHPDAIN
Template Known Secondary structure  S




TT


TT
TT


Template Predicted Secondary structure 











Template SS confidence 





























   315....320.........330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions