Job Description P07024 Confidence 99.55% Date Thu Jan 5 11:00:06 GMT 2012 Rank 20 Aligned Residues 291 % Identity 15% Template c3t1iC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Resolution 3.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		K	I	T	V	L	H	T	N	D	H	H	G	H	F	W	R	N	E	Y	G	E	Y	G	L	A	A	Q	K	T	L	V	D	G	I	R	K	E	V	A	A	E	G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence													.	.																																				.																										.	.	.	.	.	.
Template Conservation													.	.																																				.
Template Sequence		T	F	K	I	L	V	A	T	D	I	H	.	.	L	G	F	X	E	K	D	A	V	R	G	N	D	T	F	V	T	L	D	E	I	L	R	L	A	Q	E	N	E	V	D	F	I	L	L	.	G	G	D	L	F	H	E	N	K	P	S	R	K	T	L	H	T	C	L	E	L	L	R	K	Y	C	X	G	D	R	P
Template Known Secondary structure													.	.	B	T	T	T	S	S		T	T	T	T	T																T	T		S					.		S		S	B	S	S	S	S																		B	S	S	S
Template Predicted Secondary structure													.	.																																				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
															107	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	Y	D	A	M	A	I	.	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L	F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.									.																																									.
Template Conservation																																																																.
Template Sequence		V	Q	F	E	I	L	S	D	Q	S	N	L	N	I	S	I	P	V	F	S	I	H	G	N	H	D	D	P	T	G	A	D	A	L	C	A	L	D	I	L	S	C	A	G	F	V	N	H	F	G	R	S	X	S	V	E	K	I	D	I	S	P	.	V	L	L	Q	K	G	S	T	K	I	A	L	Y	G	L	G	S
Template Known Secondary structure								S	S						B		S								S	S	S			B	T	T	T	T	B										T	S										S	S							.						T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F	R	K	P	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D	N	G	E	H	G	S	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	H
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		I	P	D	E	R	L	Y	R	X	F	V	N	K	K	V	T	X	L	R	P	.	.	.	.	.	.	.	.	.	.	.	K	E	D	E	N	S	W	F	N	L	F	V	I	H	Q	N	R	S	K	H	G	S	T	N	F	I	P	.	.	.	.	.	.	.	E	Q	F	L	D	D	F	I	D	L	V	I	W	G	H
Template Known Secondary structure													T	T								.	.	.	.	.	.	.	.	.	.	.	S	S		G	G	G									S			S		S	S	S	S	S	S			.	.	.	.	.	.	.	G	G	G	S		T	T								S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.												.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290										.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	D	P	V	C	M	A	A	E	N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	.	.	.	.	.	.	.	.	.	W	G	K	Y	V	G	R	A	D	F	E	F	R	N	G	E	M	K	M	V	N	Y	Q	L	I	P	V	N	L	K	K	K	V
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	E	C	K	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	N	E	Q	Q	L	F	Y	I	S	Q	P	G	S	S	V	V	T	S	L	S	P	G	E	A	V	K	K	H	V	G	L	L	R	I	K	G	R	K	X	N	X	H	K	I	P	L	H	T	V	R	Q	F	F	X	E
Template Known Secondary structure				S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T										S	S			S							S											T	T										S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.																.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	E	D	G	K	S	E	R	V	L	Y	T	P	E	I	A	E	N	Q	Q	M	I	S	L	L	S	P	F	Q	N	K	G	K	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	L	A	N	H	P	D	I	F	N	P	D	N	P	K	V	T	Q	A	I	Q	S	F	C	L	E	K	I	E	E	X	L	E	N	A
Template Known Secondary structure					G	G	G		T	T	T			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions